CDS
| Accession Number | TCMCG066C35173 |
| gbkey | CDS |
| Protein Id | XP_034573007.1 |
| Location | complement(join(18805938..18805976,18806086..18806200,18806487..18806575,18806751..18806967,18807509..18807573,18808302..18808385,18808484..18808558,18808635..18808721,18809101..18809314,18810225..18810280,18810584..18810640,18810724..18810796,18811438..18811895)) |
| Gene | LOC117837477 |
| GeneID | 117837477 |
| Organism | Setaria viridis |
Protein
| Length | 542aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA633601 |
| db_source | XM_034717116.1 |
| Definition | RNA-binding protein 39 isoform X1 [Setaria viridis] |
EGGNOG-MAPPER Annotation
| COG_category | A |
| Description | linker between RRM2 and RRM3 domains in RBM39 protein |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko03041 [VIEW IN KEGG] |
| KEGG_ko |
ko:K13091
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway | - |
| GOs |
GO:0005575
[VIEW IN EMBL-EBI] GO:0005622 [VIEW IN EMBL-EBI] GO:0005623 [VIEW IN EMBL-EBI] GO:0005634 [VIEW IN EMBL-EBI] GO:0005654 [VIEW IN EMBL-EBI] GO:0016604 [VIEW IN EMBL-EBI] GO:0016607 [VIEW IN EMBL-EBI] GO:0031974 [VIEW IN EMBL-EBI] GO:0031981 [VIEW IN EMBL-EBI] GO:0043226 [VIEW IN EMBL-EBI] GO:0043227 [VIEW IN EMBL-EBI] GO:0043229 [VIEW IN EMBL-EBI] GO:0043231 [VIEW IN EMBL-EBI] GO:0043233 [VIEW IN EMBL-EBI] GO:0044422 [VIEW IN EMBL-EBI] GO:0044424 [VIEW IN EMBL-EBI] GO:0044428 [VIEW IN EMBL-EBI] GO:0044446 [VIEW IN EMBL-EBI] GO:0044451 [VIEW IN EMBL-EBI] GO:0044464 [VIEW IN EMBL-EBI] GO:0070013 [VIEW IN EMBL-EBI] |
Sequence
| CDS: ATGGAGTTCGACGAGTACGAGTACCTGGAGAAGGCGGTGGAGCCCGCCGCTCCGCCGGCCAACGGCTCCGGCTCCGGCGAGAAGGACCGCGGCTCGCGCCGCCGCGAGGGCGGCGAGGACCGCGCGTCGAAGCGCTCCCGCTCCGGGGAGGACCGCGACAGCGACCGCGACCGGCACCGCAGCGGCCGCGAGCACCGCGACCGGGACCGGGACCGGGATGACGGCAAGGATAAGGAGAAGAGCCGCGACAGCCGCGGGAAGGACAGGGACAGGGAGGGGAGGGACCGGGAGAAGGAGAGGGGTGACAGGCACCGGCCCAGAGATAAGGAGGTGGAACGGGAGCGGAGGAGTCGGAGCCGTTCGGAGCGGCGCCGCGCCGAGGAGGAGGAGATGGTGAGGGAGCTGGAGCGGGAGCGCGAGCGCAGCGAGCGTGGCCACTACCGTGACCGTGATGTCAGACGGAGGAAAGATGATGGTGCTGAGCCAGAAGTTGATCCAGAAAGGGACCAGAGGACTGTATTTGCCTTCCAGCTATCACTGAAGGCAGACGAAAGAGATGTTTATGAGTTCTTCTCAAGGGCTGGAAAGGTTCGTGATGTTCGCCTTATTATGGACCGAAACTCACGCCGTTCTAAAGGAGTTGGGTACATTGAGTTTTATGACGTGATGTCTGTTCCCATGGCAATTGCTCTGTCTGGTCAACCGCTTCTTGGGCAAGCAGTGATGGTTAAGCCATCTGAGGCTGAAAAGAACCTAGTTCAGTCCAATGCGACATCTGGTGGTGCGGCTTCAGGTGGAGCAAGAAAGTTGTATGTTGGCAATCTTCACTCTAATATAACTGAAGACCAATTGAGACAGGTATTCGAACCATTTGGACAAGTGGAGCTTGTTCAGCTGCCTGTAGATCCAATGACTGGACTTTGCAAAGGTTATGGTTTCATTCAGTTTGCACGGCTTGAAGATGCAAAAGCTGCGCAGAGCTTGAATGGGCAGCTTGATATCGCTGGCAGAGTTATTAAGGTTTCAGCTGTTACTGATCATGTGGGAGTACAAGTTGGTGGAGCAGCTACTGGAGATTTAGATGATGATGAAGGTGGAGGCTTGGCATTAAATGCAAGCTCCAGAGCTGCTCTTATGCTCAAATTGGACAGGAGTGGCACTGCAACAAGCTTAACTGGTGGTATTGGCACTGCTGGGGTGGCTATACCAGGACCAGCTTCATCAGTTCTTGGGGCCCCAGCAGCTACTTCTCTTCTACCACCAACTATTCCTGCTGTTGGATCAGTTCCTGGGGCACCTATGCTTCCTGTCACCAGTCAATCTACGATCATGTCAGCACCTACAGAATTCTTATTGCTTAAGAACATGTTTGACCCCACAGTGGAGACAGATCCTGATTTTGATTTGGATATCAGAGATGATGTCCAAGATGAATGTTCCAAGTTTGGTGCAGTGAAGCACATTTTTGTTGACAAAAATACTGCAGGTTTTGTGTATCTGCACTTTGATAGTGTGACTGCAGCAGCGAAGGCCCAACAAGCACTTCATGGAAGATGGTTTGCCGGCAAAATGATTACAGCAACATTTATGACCGCGCAGGAGTACAGTGCGAAGTTCCCAAACTTGTGA |
| Protein: MEFDEYEYLEKAVEPAAPPANGSGSGEKDRGSRRREGGEDRASKRSRSGEDRDSDRDRHRSGREHRDRDRDRDDGKDKEKSRDSRGKDRDREGRDREKERGDRHRPRDKEVERERRSRSRSERRRAEEEEMVRELERERERSERGHYRDRDVRRRKDDGAEPEVDPERDQRTVFAFQLSLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQPLLGQAVMVKPSEAEKNLVQSNATSGGAASGGARKLYVGNLHSNITEDQLRQVFEPFGQVELVQLPVDPMTGLCKGYGFIQFARLEDAKAAQSLNGQLDIAGRVIKVSAVTDHVGVQVGGAATGDLDDDEGGGLALNASSRAALMLKLDRSGTATSLTGGIGTAGVAIPGPASSVLGAPAATSLLPPTIPAVGSVPGAPMLPVTSQSTIMSAPTEFLLLKNMFDPTVETDPDFDLDIRDDVQDECSKFGAVKHIFVDKNTAGFVYLHFDSVTAAAKAQQALHGRWFAGKMITATFMTAQEYSAKFPNL |